Nature

Europe PMC annotated full-text corpus for gene/proteins, diseases and organisms

Europe PubMed Central (Europe PMC) 1 is a repository of life science research articles, which includes peer-reviewed full-text research articles, abstracts, and preprints–all freely available for use ...
Nature

Evaluation of cell type annotation reliability using a large language model-based identifier

Ensuring accurate cell type annotation in single-cell RNA sequencing data is a significant challenge, as both expert and automated methods can be biased or constrained by their training data, leading ...
Phys.org

Hashing complements alignment-based methods for bacterial genome annotation

DNA sequencing has changed biology like nothing else since the origin of species theory. In particular, the way we investigate microbial life has fundamentally changed. Today, we are able to sequence ...
EurekAlert!

Accurate cell type annotation for single-cell chromatin accessibility data via contrastive learning and reference guidance

Chromatin accessibility, a fundamental property of DNA that plays a critical role in gene regulation and cell identity, refers to the degree that nuclear macromolecules can access and interact with ...
EurekAlert!

MultiKano: an automatic cell type annotation tool for single-cell multi-omics data based on Kolmogorov-Arnold network and data augmentation

MultiKano is the first automatic cell type annotation method tailored to single-cell multi-omics data. MultiKano introduces a novel data augmentation strategy based on paired scRNA-seq and scATAC-seq ...